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Gene name
Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
Pig brain category (RNA)
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Gene name
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Cancers
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Other congenital disorders
Other diseases
Reproductive system diseases
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Subclass
Class
Biological process
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Disease
Keyword
Chromosome
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
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18
MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
Kidney
Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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THE PIG PROTEOME
THE PIG ATLAS
TISSUE SPECIFIC PROTEOME
UMAP GENE CLUSTERING
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55 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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1.
Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AZU1
ENSSSCG00000013415
ENSG00000172232
Azurocidin
Tissue enriched
Detected in some
bone marrow:
130.2
CEBPE
ENSSSCG00000002033
ENSG00000092067
CCAAT/enhancer binding protein epsilon
Tissue enhanced
Detected in some
adipose tissue:
4.7
bone marrow:
21.7
dura mater:
7.9
CLEC1B
ENSSSCG00000000650
ENSG00000165682
C-type lectin domain family 1 member B
Tissue enhanced
Detected in some
bone marrow:
10.0
dura mater:
12.8
lymphoid tissue:
7.5
EPX
ENSSSCG00000017630
ENSG00000121053
Eosinophil peroxidase
Group enriched
Detected in some
bone marrow:
70.8
dura mater:
18.8
ERMAP
ENSSSCG00000021745
ENSG00000164010
Erythroblast membrane associated protein (Scianna blood group)
Tissue enhanced
Detected in many
dura mater:
20.5
HBM
ENSSSCG00000007977
ENSG00000206177
Hemoglobin subunit mu
Tissue enriched
Detected in many
dura mater:
77.5
HBZ
ENSSSCG00000007975
ENSG00000130656
Hemoglobin subunit zeta
Tissue enhanced
Detected in many
bone marrow:
5.8
cartilage:
5.4
dura mater:
12.5
IBSP
ENSSSCG00000009219
ENSG00000029559
Integrin binding sialoprotein
Group enriched
Detected in some
bone marrow:
43.8
cartilage:
19.9
dura mater:
44.2
ovary:
57.5
IL1R2
ENSSSCG00000028331
ENSG00000115590
Interleukin-1 receptor type 2 precursor
Group enriched
Detected in some
bone marrow:
28.9
skin:
31.0
testis:
9.3
upper respiratory system:
8.9
KLF1
ENSSSCG00000013730
ENSG00000105610
Krueppel-like factor 1
Group enriched
Detected in some
bone marrow:
4.0
dura mater:
13.7
LEPR
ENSSSCG00000025188
ENSG00000116678
Leptin receptor precursor
Tissue enhanced
Detected in many
bone marrow:
44.4
choroid plexus:
52.3
MMP8
ENSSSCG00000029675
ENSG00000118113
Matrix metallopeptidase 8
Tissue enriched
Detected in some
dura mater:
26.8
MPO
ENSSSCG00000017637
ENSG00000005381
Myeloperoxidase
Tissue enriched
Detected in some
bone marrow:
70.8
na
ENSSSCG00000001829
Tissue enriched
Detected in some
dura mater:
11.7
na
ENSSSCG00000001979
Group enriched
Detected in some
bone marrow:
13.8
dura mater:
14.2
lymphoid tissue:
4.8
na
ENSSSCG00000003051
ENSG00000204936
Group enriched
Detected in some
bone marrow:
50.2
dura mater:
37.7
na
ENSSSCG00000003247
Tissue enriched
Detected in some
dura mater:
10.0
na
ENSSSCG00000005274
Tissue enhanced
Detected in some
adipose tissue:
1.7
bone marrow:
2.9
esophagus:
1.0
mouth:
1.5
testis:
1.7
na
ENSSSCG00000009046
Tissue enriched
Detected in some
dura mater:
43.2
na
ENSSSCG00000011334
Group enriched
Detected in some
bone marrow:
28.4
dura mater:
70.4
na
ENSSSCG00000012145
Tissue enhanced
Detected in some
bone marrow:
3.4
pineal gland:
8.3
na
ENSSSCG00000014727
Tissue enhanced
Detected in some
brain:
1.4
dura mater:
4.5
heart:
1.3
testis:
3.6
na
ENSSSCG00000016183
ENSG00000180871
Tissue enhanced
Detected in some
bone marrow:
6.5
ductus deferens:
9.1
dura mater:
9.6
ovary:
17.6
stomach:
6.2
na
ENSSSCG00000022042
Group enriched
Detected in some
bone marrow:
46.0
dura mater:
22.6
na
ENSSSCG00000022701
Group enriched
Detected in some
bone marrow:
21.5
lymphoid tissue:
26.3
na
ENSSSCG00000025681
ENSG00000141179
Tissue enriched
Detected in many
dura mater:
30.8
na
ENSSSCG00000027553
ENSG00000156575
Group enriched
Detected in some
bone marrow:
130.3
dura mater:
49.4
na
ENSSSCG00000028308
Tissue enhanced
Detected in some
bone marrow:
3.0
dura mater:
3.0
lymphoid tissue:
1.0
na
ENSSSCG00000031090
Group enriched
Detected in some
bone marrow:
153.2
dura mater:
112.2
na
ENSSSCG00000031326
Group enriched
Detected in some
bone marrow:
65.9
dura mater:
28.5
na
ENSSSCG00000031673
Tissue enriched
Detected in some
dura mater:
6.1
na
ENSSSCG00000032270
Not detected
Not detected
na
ENSSSCG00000032351
Tissue enhanced
Detected in some
endometrium:
2.1
mouth:
2.9
na
ENSSSCG00000032460
Group enriched
Detected in some
dura mater:
10.7
lymphoid tissue:
10.2
na
ENSSSCG00000034363
Tissue enriched
Detected in some
dura mater:
8.5
na
ENSSSCG00000034559
Tissue enriched
Detected in some
dura mater:
12.0
na
ENSSSCG00000035306
Group enriched
Detected in some
dura mater:
4.7
lymphoid tissue:
3.1
testis:
2.9
na
ENSSSCG00000035377
ENSG00000169385
Group enriched
Detected in some
bone marrow:
55.1
dura mater:
23.6
na
ENSSSCG00000035665
Tissue enriched
Detected in single
dura mater:
9.5
na
ENSSSCG00000035866
Tissue enhanced
Detected in many
bone marrow:
4.8
lens:
6.1
na
ENSSSCG00000036163
Tissue enhanced
Detected in some
brain:
2.9
dura mater:
2.7
gallbladder:
1.6
male glands:
1.7
na
ENSSSCG00000036661
Tissue enhanced
Detected in some
bone marrow:
1.6
skin:
1.1
testis:
2.1
na
ENSSSCG00000037626
Tissue enhanced
Detected in some
bone marrow:
4.3
dura mater:
12.3
na
ENSSSCG00000038268
Group enriched
Detected in some
brain:
2.8
dura mater:
5.2
na
ENSSSCG00000039465
Group enriched
Detected in some
bone marrow:
2.9
dura mater:
11.2
na
ENSSSCG00000039869
Group enriched
Detected in some
bone marrow:
37.4
dura mater:
31.0
NFE2
ENSSSCG00000000289
ENSG00000123405
Transcription factor NF-E2 45 kDa subunit
Group enriched
Detected in some
bone marrow:
19.3
dura mater:
21.5
NPG3
ENSSSCG00000011349
Protegrin-3
Group enriched
Detected in some
bone marrow:
184.7
dura mater:
123.3
OR6S1
ENSSSCG00000002130
ENSG00000181803
Olfactory receptor family 6 subfamily S member 1
Tissue enhanced
Detected in single
dura mater:
1.7
PRTN3
ENSSSCG00000013417
ENSG00000196415
Proteinase 3
Tissue enriched
Detected in some
bone marrow:
129.5
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